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Tuesday
Mar192024

Sensory Science on the BBC

Cambridge University sensory-science art for people with sight loss

By Kate Bradbrook and Helen Burchell

BBC News, Cambridgeshire

Art exploring science and created for people with sight loss is on show as part of a festival organised by Cambridge University.

Sensory Science, at St Catharine's College, is part of the Cambridge Festival, which explores aspects of research carried out at the university and is open to the public.

Scientists at the Department of Pathology worked with local artists to create pieces to communicate science.

The festival runs until 28 March.

Sensory Science is the brainchild of Dr Erica Tandori, a low-vision artist based in Melbourne, Australia.

She was diagnosed with Stargardt disease - a form of macular dystrophy - when she was 23, and trained in creative arts and scientific communication.

"I'm an artist that's absolutely in love with science," she said.

"The whole idea of making things multi-sensory brings knowledge to life and makes it more accessible to everyone."

The pieces on show include lights and music and "is about all of us - cells and the immune system - and it should be available to all of us".

Together with Prof Jamie Rossjohn from Monash University in Australia, Dr Tandori saw the need for science communication to reach the blind and low-vision community.


She also worked with Prof Adrian Liston, professor of pathology at Cambridge University, who said: "The really unique aspect about this particular event is that we're really going for a multi-sensory approach.

"This involves not just the visual but auditory soundscapes, tactile maps, smell - other ways of communicating concepts.

"The aim is to make this as inclusive as possible.

"Using multiple senses is obviously a huge advantage if you want to include the blind and low-vision community."

Dr Julia Johnson, from Anglia Ruskin University, worked on the project with art and pathology students.

"We're looking at art's value in addressing some of the topics here," she said.

"We're thinking about how art can act as a communication tool for engaging audiences.

"Through a very sensory and tactile approach, young people and low-vision audiences can understand more about scientific models."

Monday
Mar182024

Sensory Science

Friday
Mar082024

Liston-Dooley lab at the Cambridge Festival!

Our lab is gearing up for the Cambridge Festival! A lot of amazing activities, with something for everyone, so hopefully everyone in Cambridge can come and join at least one of these.

First of all, for our youngest visitors come along to a book reading of our kids books "Maya's Marvellous Medicine" and "Battle Robots of the Blood". We'll have some colouring in too, to keep them busy.

For kids a little older, Family Day at Pathology has a ton of activities! Our lab is hosting a display of "VirusFighter". See how your kids would have done as PM during the pandemic, or test whether they can successfully engineer a bioweapon to stop an invasion of wombats! (They can also play online now!)

 For all ages, we have a real treat, Sensory Science. This is a fantastic program that uses multi-sensory art to communicate the science of pathology. Honestly, everyone should come and experience this exhibit at St Catharine's College, the teams have put in so much work into their art piece. Our lab has coordinate the program and is exhibiting new art on neuroinflammation and cancer formation. We are also hosting the amazing Dr Erica Tandori, who started the Sensory Science movement back in Australia, and specialises in making science communication accessible to the blind and low vision community.

Finally, adults interested in the immune system are welcome to join my public seminar on how diversity shapes our immune responses!

Tuesday
Feb202024

Congratulations to Jasmine Hughes!

Congratulations to Jasmine Hughes for her Cook Society Award for dedicating herself to social justice, equality and strengthening the campus community, during her time at Duke University! I'm glad to say she is keeping up the focus during her PhD here at the University of Cambridge!

Friday
Feb162024

A looming threat to scientific publication

You can't argue with Professor John Tregoning, of Imperial College: these graphics are "objectively funny". 

But beyond the snickering, there is a reason why the biomedical science community is in uproar over this paper

It is a failure of peer review that this article was ever published in a scientific journal. Scientific articles are meant to be peer reviewed, precisely to catch garbage articles like this. No system is ever 100% perfect, and science is a rapidly-moving self-correcting ecosystem, but this is just so... prominant... a mistake, how did it happen?

To understand, it is important to recognise that scientists have been aware of the short-comings of peer review for years (and there are many!). The scientific publishing system is flawed: it is hard to find anyone that would argue against that. Unfortunately many of the "solutions" have made the problem worse.

"Open access publishing" opened up science to the world. Rather than "pay to read", scientists "pay to publish". On the plus side, the public can access scientific articles cost-free. On the down-side, it provided a market for pseudo-scientific journals, "predatory journals" to open up and accept any "scientific" article that someone is willing to pay to publish. One of the leading journals in the "open access" movement was "Frontiers". They genuinely transformed the style of peer review, making it rapid, interactive and very, very scaleable. Unfortunately the utopian vision of the journal clashed with the perverse economic incentives of an infinitely scaleable journal that makes thousands of dollars for every article it accepted. I was an early editor at the journal, and soon clashed with the publishing staff, who made it next-to-impossible to reject junk articles. I resigned from the journal 10 years ago, because the path they were taking was a journey to publishing nonsense for cash.

Fast-forward 10 years, and Frontiers publishes more articles than all society journals put together. Frontiers in Immunology publishes ~10,000 articles a year; as a reference, reputable society journals such as Immunology & Cell Biology publish ~100 papers a year. Considering Frontiers earns ~$3000 per article, it is a massive profit-making machine. The vision of transforming science publishing is gone, replaced with growth at all costs. Add onto this a huge incentive to publish papers, even ones that no one reads, and it added to a perverse economy, with "paper mills" being paid to write fake papers and predatory journals being paid to publish them, all to fill up a CV.

Generative AI turbo-charges this mess. Some basic competency at using generative AI, and scamming scientists can rapidly fake a paper. This is where #ratdckgate comes in. The paper is obviously faked, text and figures. Yet it got published. A lot of failures in the system here, in particular perverse incentives to cheat, the generation of an efficient marketplace for cheating, and a journal that over-rode the peer reviewers because it wanted the publication costs. 

As the Telegraph reports, this is "a cock up on a massive scale".

No one really cares about this article, one way or another. Frontiers has withdrawn the article, and even congratulated itself on its rapid action for the one fake paper that went viral, without dealing with the ecosystem it has created. The reason why the scientific community cares is that this paper is just the tip of the iceberg. The scientific publishing system was designed to catch good-faith mistakes. It wasn't designed to catch fraud, and isn't really suitable for that purpose. Yes, reviewers and editors look out for fraud, but as generative AI advances it will be harder and harder to catch it, even at decent journals. It is an arms race that we can't win, and many in the scientific publishing world are struggling to see a solution.

There are many lessons to be learned here:

  • The scientific career pathway provides perverse incentives to cheat. That is human nature, but we need to change research culture to minimise it
  • Even good-intentions can create toxic outcomes, such as open access creating the pay-to-publish market place. We need to redesign scientific publishing fully aware of the way it may be gamed, and pre-empt toxic outcomes
  • Peer review isn't perfect, and isn't even particularly good at catching deliberate fraud. We probably need to separate peer-review from fraud detection, and take a seperate approach to each
  • Scientific journals range radically in the quality of peer review. We need a rigorous accreditation system to provide the stick to publish journals that harm science
  • Generative AI has huge potential for harm, and we need to actively design systems to mitigate those harms

Improving scientific publishing is a challenge for all of us. In a world where science is undermined by politics, we cannot afford to provide the ammunition to vaccine deniers, climate change deniers, science skeptics and others who want to discredit science for their own agenda. So we need to get our house in order.

Sunday
Feb112024

International Day of Women in Science

Friday
Jan262024

New positions in the lab!

We are recruiting two new positions, a Postdoctoral Research Scientist and a Research Laboratory Technician, to join our lab! 

This translational research project aims to develop novel technologies for treating neuroimmunology into clinic-ready molecules. You will contribute to the optimisation of therapeutics for brain delivery to patients, as part of the commercialisation pathway for a recently developed neuroinflammation treatment (Yshii et al, Nature Immunology 2022). The laboratory is an inclusive, international and diverse team, supportive of your personal and career development. A positive approach to kind and collaborative interactions with the team is essential! You will benefit from the collaborative and collegial environment of the laboratory, and potential career growth opportunities within the laboratory and within the developing spin-off company Aila Biotech are possible for a successful post-holders. 

The Post-doctoral Scientist post would be suitable for a new PhD graduate who is motivated to develop new skills in both neuroimmunology and in commercialisation. The post is designed to result in scientific publications and patent applications. Post-doctoral Scientist's apply here.

The Research Laboratory Technician post would be suitable for a candidates from a range of backgrounds, such as experience in animal handling, or a basic laboratory experience, or a Masters-level degree in immunology, neuroscience, or a related field. Applicants are not expected to enter with the full range of these skills or experiences. Research Laboratory Technician's apply here.
Thursday
Dec212023

2023 Lafferty debate

The Lafferty debate is, for me, always the highlight of the Australian and New Zealand Society of Immunology annual meeting. The comedic faux-scientific debate is always a huge amount of fun, and is part of what creates the community feeling of immunology within Australia and New Zealand. 

Being asked to take-part in the debate, 20 years after leaving Australia, was, by contrast, petrifying. 

Debates have always felt like something I should enjoy doing, but actually the need to argue one side, regardless of how logic pans out, it something extremely foreign to me. To do so in a funny manner, in front of hundreds of my colleagues, on the big moment of the year... that is just not me. 

I'm up on stage, giving talks and fielding questions, so often that I should have felt comfortable with the "let's wing it and have fun" approach of my team members. But for whatever reason, anything other than a scientific talk triggers my performance phobia, and this really made me anxious!

A huge relief that both teams of the debate played off each other so well, the comedic timing landed, and the whole event was actually really enjoyable! I'm not sure I'd ever sign up for it again, but I am really glad that I was a part of such a key event with talented and funny immunologists.

Saturday
Nov252023

Congratulations Dr Julika Neumann!

Congratulations to the amazing Dr Julika Neumann, who just graduated from the lab, as our final Belgian PhD!

Julika secretly did two PhDs rather than one, with an outstanding clinical immunology PhD where she discovered a new immunodeficiency (and won the Golden Pipette!) and another systems immunology project on SARS-CoV2, with the first paper published and several systems vaccinology papers coming out soon!

Julika was a talented immunologist and bioinformatician, but above all an exceptional team-player and detail-orientated fixer. We all congratulate Julika on an exceptional PhD and her positive impact on all of those around her over the past four years. All the best Julika!

Wednesday
Oct182023

2023 lab retreat re-cap

We just completed a very successful lab retreat, this year held at St Catharine's College, Cambridge. It was perfect timing, with our new students starting and getting to meet the entire team, not to mention getting incredible feedback from everyone on their new projects. I'm so proud to be a part of such an amazing team of scientists!

I started by recapping the successes of the lab in 2023 - and there have been plenty! 16 papers published so far this year (and another 12 submitted!), ~£1.5m brought into the department in grants and fellowships, our spin-off company Aila Biotech getting into an accelerator program, and successful alumni moving on to great things! But we run the lab retreat for the future, not the past. Two full days of exciting science, from projects right at the conceptual phase through to projects that have matured and need the finishing touches. Of course it wouldn't be a lab retreat with the presentation of the Golden Pipette! This year's went to Amy Dashwood, a talented scientist and a positive influence on team culture. 

We had great team building exercises too! We had to guess each person's pathway to becoming a scientist, picking out baby photos and origin story, matching up role-models to teenage pictures, and picking out the motivation for each lab member to be in science today. Plus a set of AI-generated limericks for each person, and social activities from a pub lunch to walks through the Cambridge botanic gardens and museums. 

I also really appreciated having our external guests come in to give their wisdom to the team, and it was especially nice that many of our external experts are lab alumni!